Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide mfs transporter | SB49_RS09705 | Not Available | Negative | 2180913 - 2182445 | 56124.6 |
| s9 family peptidase | SB49_RS09710 | Not Available | Negative | 2182460 - 2184625 | 82258.0 |
| hydroxymethylglutaryl-coa reductase, degradative | SB49_RS09715 | Not Available | Positive | 2184788 - 2186113 | 49378.8 |
| gydia family ghmp kinase | SB49_RS09720 | Not Available | Positive | 2186110 - 2187042 | 35317.4 |
| peptidylprolyl isomerase | SB49_RS09725 | Not Available | Negative | 2187099 - 2189219 | 78325.6 |
| hemolysin family protein | SB49_RS09730 | Not Available | Negative | 2189452 - 2190741 | 48722.2 |
| lps export abc transporter periplasmic protein lptc | SB49_RS09740 | Not Available | Negative | 2190946 - 2191545 | 22980.9 |
| hypothetical protein | SB49_RS09745 | Not Available | Negative | 2191547 - 2192923 | 50612.6 |
| hypothetical protein | SB49_RS09750 | Not Available | Negative | 2192956 - 2194218 | 45830.1 |
| type iii pantothenate kinase | SB49_RS09755 | Not Available | Negative | 2194219 - 2194947 | 26848.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
