Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mrec | SB49_RS09650 | Not Available | Positive | 2168400 - 2169218 | 30655.9 |
| penicillin-binding protein 2 | SB49_RS09660 | Not Available | Positive | 2169713 - 2171581 | 70354.5 |
| rod shape-determining protein roda | SB49_RS09665 | Not Available | Positive | 2171571 - 2172854 | 48470.4 |
| dna/rna non-specific endonuclease | SB49_RS09670 | Not Available | Negative | 2172851 - 2173651 | 31182.8 |
| carboxy terminal-processing peptidase | SB49_RS09675 | Not Available | Negative | 2173744 - 2175873 | 81530.1 |
| 5'/3'-nucleotidase sure | SB49_RS09680 | Not Available | Positive | 2176087 - 2176866 | 28467.8 |
| hypothetical protein | SB49_RS09685 | Not Available | Positive | 2176859 - 2177140 | 10275.0 |
| lipid-a-disaccharide synthase | SB49_RS09690 | Not Available | Positive | 2177163 - 2178275 | 42045.3 |
| c40 family peptidase | SB49_RS09695 | Not Available | Positive | 2178321 - 2178899 | 21172.2 |
| comec/rec2 family competence protein | SB49_RS09700 | Not Available | Positive | 2178889 - 2180910 | 76013.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
