Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS09600 | Not Available | Positive | 2158413 - 2159330 | 35068.8 |
| preprotein translocase subunit secg | SB49_RS09605 | Not Available | Positive | 2159338 - 2159694 | 12299.1 |
| co-chaperone groes | SB49_RS09610 | Not Available | Positive | 2159835 - 2160113 | 10041.3 |
| chaperonin groel | SB49_RS09615 | Not Available | Positive | 2160134 - 2161762 | 57135.0 |
| heavy-metal-associated domain-containing protein | SB49_RS09620 | Not Available | Negative | 2161833 - 2162189 | 13404.5 |
| tonb-dependent receptor | SB49_RS09625 | Not Available | Negative | 2162242 - 2164476 | 84317.7 |
| hyc_cc_pp family protein | SB49_RS09630 | Not Available | Negative | 2164583 - 2164996 | 15179.3 |
| gaf domain-containing protein | SB49_RS09635 | Not Available | Positive | 2165142 - 2165594 | 16672.7 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | SB49_RS09640 | Not Available | Positive | 2165690 - 2167222 | 55817.4 |
| rod shape-determining protein | SB49_RS09645 | Not Available | Positive | 2167279 - 2168307 | 37401.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
