Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility protein gldn | SB49_RS09550 | Not Available | Negative | 2145068 - 2145970 | 34816.4 |
| gliding motility protein gldm | SB49_RS09555 | Not Available | Negative | 2146081 - 2147649 | 57452.7 |
| gliding motility protein gldl | SB49_RS09560 | Not Available | Negative | 2147705 - 2148358 | 23108.6 |
| gliding motility lipoprotein gldk | SB49_RS09565 | Not Available | Negative | 2148433 - 2149791 | 52270.8 |
| formimidoylglutamase | SB49_RS09570 | Not Available | Negative | 2149909 - 2151066 | 43810.3 |
| type i dna topoisomerase | SB49_RS09575 | Not Available | Negative | 2151069 - 2153564 | 93457.6 |
| lvivd repeat-containing protein | SB49_RS09580 | Not Available | Negative | 2153687 - 2154931 | 46517.1 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | SB49_RS09585 | Not Available | Positive | 2155088 - 2156533 | 54402.0 |
| sigma-54-dependent fis family transcriptional regulator | SB49_RS09590 | Not Available | Positive | 2156606 - 2157886 | 48521.7 |
| lps assembly lipoprotein lpte | SB49_RS09595 | Not Available | Positive | 2157888 - 2158406 | 19278.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
