Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| head gin domain-containing protein | SB49_RS09500 | Not Available | Positive | 2132719 - 2133399 | 24366.2 |
| cpxcg motif-containing cysteine-rich protein | SB49_RS09505 | Not Available | Negative | 2133462 - 2133644 | 7067.34 |
| tolc family protein | SB49_RS09510 | Not Available | Negative | 2133660 - 2135009 | 50806.0 |
| efflux rnd transporter permease subunit | SB49_RS09515 | Not Available | Negative | 2135014 - 2138289 | 120175.0 |
| efflux rnd transporter periplasmic adaptor subunit | SB49_RS09520 | Not Available | Negative | 2138289 - 2139422 | 42091.2 |
| hypothetical protein | SB49_RS09525 | Not Available | Negative | 2139581 - 2140483 | 33672.7 |
| hypothetical protein | SB49_RS09530 | Not Available | Negative | 2140496 - 2141386 | 33008.9 |
| abc-f family atp-binding cassette domain-containing protein | SB49_RS09535 | Not Available | Negative | 2141567 - 2143489 | 73215.5 |
| duf983 domain-containing protein | SB49_RS09540 | Not Available | Positive | 2143554 - 2143937 | 14477.1 |
| fad-binding oxidoreductase | SB49_RS09545 | Not Available | Negative | 2143927 - 2144988 | 40115.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
