Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid carrier protein | SB49_RS00885 | Not Available | Positive | 182795 - 184861 | 73582.5 |
| sodium-dependent transporter | SB49_RS00890 | Not Available | Positive | 185008 - 186822 | 66845.6 |
| helix-hairpin-helix domain-containing protein | SB49_RS00895 | Not Available | Positive | 186985 - 187863 | 33468.3 |
| acyl-coa dehydrogenase family protein | SB49_RS00900 | Not Available | Positive | 187874 - 189043 | 43763.4 |
| 30s ribosomal protein s21 | SB49_RS00905 | Not Available | Positive | 189136 - 189330 | 7700.49 |
| tyrosine-type recombinase/integrase | SB49_RS00910 | Not Available | Positive | 189436 - 190326 | 33937.1 |
| ribosome hibernation-promoting factor, hpf/yfia family | SB49_RS00915 | Not Available | Positive | 190370 - 190672 | 11574.1 |
| Trna-thr | Not Available | Not Available | Positive | 190776 - 190849 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 190874 - 190955 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 191049 - 191121 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
