Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS09350 | Not Available | Negative | 2098908 - 2099156 | 9017.76 |
| lipid a-modifier lpxr family protein | SB49_RS09355 | Not Available | Positive | 2099515 - 2100414 | 34472.6 |
| hypothetical protein | SB49_RS09360 | Not Available | Positive | 2100615 - 2101040 | 16150.2 |
| hypothetical protein | SB49_RS09365 | Not Available | Positive | 2101214 - 2101663 | 17039.4 |
| hypothetical protein | SB49_RS09370 | Not Available | Positive | 2101808 - 2102353 | 20993.8 |
| hypothetical protein | SB49_RS09375 | Not Available | Positive | 2102535 - 2102783 | 9764.22 |
| carboxypeptidase regulatory-like domain-containing protein | SB49_RS09380 | Not Available | Negative | 2102986 - 2105700 | 102286.0 |
| glpgli family protein | SB49_RS09385 | Not Available | Negative | 2105749 - 2106585 | 32028.2 |
| duf2200 domain-containing protein | SB49_RS09390 | Not Available | Positive | 2107027 - 2107392 | 14147.2 |
| heavy metal translocating p-type atpase | SB49_RS09395 | Not Available | Positive | 2107477 - 2109429 | 71376.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
