Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | SB49_RS09295 | Not Available | Positive | 2087506 - 2088105 | 22585.7 |
| tpm domain-containing protein | SB49_RS09300 | Not Available | Positive | 2088116 - 2088553 | 16440.3 |
| ygcg family protein | SB49_RS09305 | Not Available | Positive | 2088534 - 2089322 | 27972.6 |
| outer membrane beta-barrel protein | SB49_RS09310 | Not Available | Negative | 2089380 - 2092154 | 104133.0 |
| ribosome biogenesis gtpase der | SB49_RS09315 | Not Available | Negative | 2092249 - 2093556 | 49382.2 |
| hypothetical protein | SB49_RS09320 | Not Available | Positive | 2093635 - 2094126 | 19057.5 |
| gtpase era | SB49_RS09325 | Not Available | Negative | 2094127 - 2095011 | 33980.2 |
| sodium:alanine symporter family protein | SB49_RS09330 | Not Available | Negative | 2094998 - 2096365 | 49265.6 |
| Trna-met | Not Available | Not Available | Positive | 2096486 - 2096558 | Not Available |
| hypothetical protein | SB49_RS09340 | Not Available | Positive | 2096884 - 2098530 | 64036.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
