Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosaminidase domain-containing protein | SB49_RS09250 | Not Available | Negative | 2077451 - 2078299 | 32420.2 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | SB49_RS09255 | Not Available | Negative | 2078296 - 2079201 | 33757.9 |
| hypothetical protein | SB49_RS09260 | Not Available | Negative | 2079214 - 2079459 | 10211.3 |
| duf5522 domain-containing protein | SB49_RS16085 | Not Available | Positive | 2079704 - 2079862 | 6167.44 |
| duf4136 domain-containing protein | SB49_RS09265 | Not Available | Positive | 2079938 - 2080525 | 22174.5 |
| aromatic amino acid hydroxylase | SB49_RS09270 | Not Available | Positive | 2080643 - 2082394 | 65545.2 |
| gscfa domain-containing protein | SB49_RS09275 | Not Available | Negative | 2082407 - 2083351 | 36213.7 |
| alanine--trna ligase | SB49_RS09280 | Not Available | Negative | 2083453 - 2086068 | 98357.0 |
| m23 family metallopeptidase | SB49_RS09285 | Not Available | Positive | 2086172 - 2087149 | 37249.5 |
| merr family transcriptional regulator | SB49_RS09290 | Not Available | Positive | 2087151 - 2087480 | 12684.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
