Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS09210 | Not Available | Positive | 2066296 - 2066973 | 25075.9 |
| hypothetical protein | SB49_RS09215 | Not Available | Positive | 2067031 - 2067720 | 26034.0 |
| lipoyl(octanoyl) transferase lipb | SB49_RS09220 | Not Available | Negative | 2067744 - 2068454 | 26836.5 |
| yqae/pmp3 family membrane protein | SB49_RS15890 | Not Available | Negative | 2068518 - 2068676 | 5599.22 |
| lysine--trna ligase | SB49_RS09225 | Not Available | Positive | 2068831 - 2070522 | 64168.5 |
| dass family sodium-coupled anion symporter | SB49_RS09230 | Not Available | Positive | 2070634 - 2072064 | 51302.1 |
| zinc-dependent metalloprotease | SB49_RS09235 | Not Available | Positive | 2072531 - 2075017 | 94672.6 |
| hypothetical protein | SB49_RS15975 | Not Available | Positive | 2075208 - 2075390 | 6649.0 |
| duf4890 domain-containing protein | SB49_RS09240 | Not Available | Positive | 2075607 - 2076065 | 17983.7 |
| glutamate-1-semialdehyde 2,1-aminomutase | SB49_RS09245 | Not Available | Negative | 2076159 - 2077448 | 46128.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
