Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | SB49_RS09105 | Not Available | Negative | 2031277 - 2031969 | 24577.2 |
| sodium:proton antiporter nhad | SB49_RS09110 | Not Available | Negative | 2032018 - 2033349 | 48159.3 |
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | SB49_RS09115 | Not Available | Negative | 2033366 - 2034592 | 44980.0 |
| acyl-coa dehydrogenase | SB49_RS09120 | Not Available | Positive | 2034910 - 2036052 | 41600.7 |
| glutamate synthase large subunit | SB49_RS09125 | Not Available | Positive | 2036380 - 2040888 | 166958.0 |
| glutamate synthase subunit beta | SB49_RS09130 | Not Available | Positive | 2040897 - 2042363 | 53552.1 |
| mfs transporter | SB49_RS09135 | Not Available | Negative | 2042434 - 2043687 | 45783.6 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2043924 - 2044035 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2044162 - 2046993 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2047174 - 2047250 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
