Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system outer membrane channel protein porv | SB49_RS09055 | Not Available | Negative | 2020284 - 2021429 | 42088.2 |
| gliding motility lipoprotein gldj | SB49_RS09060 | Not Available | Positive | 2021860 - 2023524 | 63247.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SB49_RS09065 | Not Available | Positive | 2023765 - 2025039 | 47213.6 |
| Trna-val | Not Available | Not Available | Positive | 2025224 - 2025298 | Not Available |
| carbohydrate kinase family protein | SB49_RS09075 | Not Available | Positive | 2025703 - 2026686 | 36615.9 |
| nad-dependent succinate-semialdehyde dehydrogenase | SB49_RS09080 | Not Available | Negative | 2026804 - 2028192 | 50193.1 |
| Trna-val | Not Available | Not Available | Positive | 2028641 - 2028718 | Not Available |
| folylpolyglutamate synthase/dihydrofolate synthase family protein | SB49_RS09090 | Not Available | Negative | 2028824 - 2030035 | 45125.6 |
| hypothetical protein | SB49_RS09095 | Not Available | Negative | 2030039 - 2030878 | 29957.6 |
| biopolymer transporter exbd | SB49_RS09100 | Not Available | Negative | 2030881 - 2031267 | 14347.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
