Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | SB49_RS08950 | Not Available | Positive | 1998254 - 1998742 | 16866.8 |
| m3 family metallopeptidase | SB49_RS08955 | Not Available | Positive | 1998846 - 2000864 | 77392.6 |
| rhodanese-like domain-containing protein | SB49_RS08960 | Not Available | Negative | 2000928 - 2001287 | 13299.3 |
| sigma-70 family rna polymerase sigma factor | SB49_RS08965 | Not Available | Positive | 2001367 - 2001921 | 21180.2 |
| hypothetical protein | SB49_RS08975 | Not Available | Negative | 2002135 - 2002959 | 31597.8 |
| aminomethyl-transferring glycine dehydrogenase | SB49_RS08980 | Not Available | Positive | 2003101 - 2005950 | 104303.0 |
| 3-oxoacyl-acp synthase iii family protein | SB49_RS08985 | Not Available | Positive | 2006122 - 2007177 | 38859.5 |
| methyltransferase | SB49_RS08990 | Not Available | Positive | 2007179 - 2007715 | 21129.3 |
| glycosyltransferase family a protein | SB49_RS08995 | Not Available | Positive | 2007736 - 2008590 | 32119.8 |
| alkaline phosphatase pafa | SB49_RS09000 | Not Available | Negative | 2008647 - 2010323 | 61938.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
