Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radc family protein | SB49_RS08900 | Not Available | Negative | 1983991 - 1984689 | 25383.0 |
| udp-n-acetylmuramate--l-alanine ligase | SB49_RS08905 | Not Available | Negative | 1984770 - 1986128 | 50894.6 |
| cupin domain-containing protein | SB49_RS08910 | Not Available | Positive | 1986273 - 1986590 | 11844.3 |
| sdr family oxidoreductase | SB49_RS08915 | Not Available | Positive | 1986593 - 1987378 | 28343.1 |
| alpha-2-macroglobulin | SB49_RS08920 | Not Available | Positive | 1987572 - 1993625 | 230038.0 |
| doxx family membrane protein | SB49_RS08925 | Not Available | Positive | 1993697 - 1994071 | 13929.9 |
| duf4136 domain-containing protein | SB49_RS08930 | Not Available | Negative | 1994182 - 1994712 | 19534.3 |
| gtpase obge | SB49_RS08935 | Not Available | Negative | 1994767 - 1995768 | 36978.1 |
| adenylate kinase | SB49_RS15885 | Not Available | Negative | 1995842 - 1996948 | 41582.8 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SB49_RS08945 | Not Available | Positive | 1997084 - 1998238 | 43144.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
