Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS08850 | Not Available | Positive | 1974459 - 1975187 | 28066.3 |
| hypothetical protein | SB49_RS08855 | Not Available | Positive | 1975351 - 1976145 | 30496.1 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | SB49_RS08860 | Not Available | Positive | 1976207 - 1976950 | 26822.8 |
| rhomboid family intramembrane serine protease | SB49_RS08865 | Not Available | Negative | 1976953 - 1977699 | 28722.1 |
| replication-associated recombination protein a | SB49_RS08870 | Not Available | Positive | 1977792 - 1979069 | 47305.0 |
| hypothetical protein | SB49_RS08875 | Not Available | Negative | 1979066 - 1979917 | 31962.2 |
| duf5723 family protein | SB49_RS08880 | Not Available | Negative | 1979931 - 1981361 | 53035.2 |
| hypothetical protein | SB49_RS08885 | Not Available | Negative | 1981358 - 1981897 | 19716.3 |
| yjjg family noncanonical pyrimidine nucleotidase | SB49_RS08890 | Not Available | Negative | 1981972 - 1982661 | 26819.2 |
| polysaccharide deacetylase family protein | SB49_RS08895 | Not Available | Negative | 1982654 - 1983901 | 48490.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
