Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l4 | SB49_RS08800 | Not Available | Negative | 1961789 - 1962418 | 23224.1 |
| 50s ribosomal protein l3 | SB49_RS08805 | Not Available | Negative | 1962418 - 1963035 | 22121.9 |
| 30s ribosomal protein s10 | SB49_RS08810 | Not Available | Negative | 1963198 - 1963503 | 11433.2 |
| elongation factor g | SB49_RS08815 | Not Available | Negative | 1963515 - 1965641 | 78181.2 |
| 30s ribosomal protein s7 | SB49_RS08820 | Not Available | Negative | 1965653 - 1966129 | 18329.5 |
| 30s ribosomal protein s12 | SB49_RS08825 | Not Available | Negative | 1966153 - 1966527 | 13661.8 |
| susc/raga family tonb-linked outer membrane protein | SB49_RS08830 | Not Available | Positive | 1966940 - 1970194 | 117154.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | SB49_RS08835 | Not Available | Positive | 1970221 - 1971867 | 59623.8 |
| hypothetical protein | SB49_RS08840 | Not Available | Positive | 1971878 - 1972849 | 34966.6 |
| aryl-sulfate sulfotransferase | SB49_RS08845 | Not Available | Positive | 1972949 - 1974295 | 50699.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
