Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | SB49_RS08655 | Not Available | Negative | 1943673 - 1944959 | 47953.0 |
| glycogen synthase | SB49_RS08660 | Not Available | Negative | 1945105 - 1946646 | 59033.6 |
| phosphopyruvate hydratase | SB49_RS08665 | Not Available | Negative | 1946787 - 1948079 | 46008.7 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | SB49_RS08670 | Not Available | Negative | 1948198 - 1949310 | 40912.5 |
| 50s ribosomal protein l17 | SB49_RS08675 | Not Available | Negative | 1949406 - 1949936 | 19433.4 |
| dna-directed rna polymerase subunit alpha | SB49_RS08680 | Not Available | Negative | 1949992 - 1950984 | 37245.9 |
| 30s ribosomal protein s4 | SB49_RS08685 | Not Available | Negative | 1951003 - 1951608 | 22932.5 |
| 30s ribosomal protein s11 | SB49_RS08690 | Not Available | Negative | 1951706 - 1952098 | 14037.0 |
| 30s ribosomal protein s13 | SB49_RS08695 | Not Available | Negative | 1952112 - 1952486 | 14114.2 |
| type b 50s ribosomal protein l36 | SB49_RS15880 | Not Available | Negative | 1952489 - 1952605 | 4572.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
