Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypeptidase-like regulatory domain-containing protein | SB49_RS08605 | Not Available | Positive | 1931387 - 1933948 | 96766.9 |
| brp/blh family beta-carotene 15,15'-dioxygenase | SB49_RS08610 | Not Available | Negative | 1934175 - 1935074 | 34641.0 |
| bacteriorhodopsin-like | SB49_RS08615 | Not Available | Positive | 1935162 - 1935890 | 27061.4 |
| arginine--trna ligase | SB49_RS08620 | Not Available | Negative | 1935962 - 1937752 | 68224.6 |
| hypothetical protein | SB49_RS08625 | Not Available | Positive | 1937902 - 1938327 | 16357.0 |
| sdr family oxidoreductase | SB49_RS08630 | Not Available | Positive | 1938394 - 1939818 | 54259.4 |
| bcct family transporter | SB49_RS08635 | Not Available | Positive | 1939878 - 1941338 | 54408.9 |
| citrulline utilization hydrolase ctlx | SB49_RS08640 | Not Available | Negative | 1941369 - 1942301 | 35175.9 |
| cbu_0592 family membrane protein | SB49_RS08645 | Not Available | Positive | 1942415 - 1942672 | 9381.03 |
| dimethylarginine dimethylaminohydrolase family protein | SB49_RS08650 | Not Available | Negative | 1942662 - 1943576 | 34954.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
