Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | SB49_RS08560 | Not Available | Positive | 1921643 - 1922482 | 31718.8 |
| voc family protein | SB49_RS08565 | Not Available | Positive | 1922514 - 1922939 | 16343.3 |
| gnat family n-acetyltransferase | SB49_RS08570 | Not Available | Negative | 1922979 - 1923434 | 17164.7 |
| alpha/beta hydrolase-fold protein | SB49_RS08575 | Not Available | Negative | 1923453 - 1925183 | 66147.6 |
| hypothetical protein | SB49_RS16035 | Not Available | Positive | 1925384 - 1925530 | 5331.34 |
| bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase | SB49_RS08580 | Not Available | Negative | 1925555 - 1926439 | 32250.3 |
| signal recognition particle protein | SB49_RS08585 | Not Available | Negative | 1926480 - 1927817 | 48421.2 |
| hypothetical protein | SB49_RS08590 | Not Available | Negative | 1927957 - 1929717 | 66122.1 |
| rna polymerase sigma factor | SB49_RS08595 | Not Available | Positive | 1929825 - 1930337 | 19822.6 |
| fecr family protein | SB49_RS08600 | Not Available | Positive | 1930492 - 1931406 | 34458.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
