Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | SB49_RS08410 | Not Available | Positive | 1892777 - 1893619 | 32033.2 |
| neutral zinc metallopeptidase | SB49_RS08415 | Not Available | Negative | 1893749 - 1894648 | 32958.9 |
| plp-dependent transferase | SB49_RS08420 | Not Available | Positive | 1895206 - 1897077 | 69753.5 |
| porin family protein | SB49_RS08425 | Not Available | Negative | 1897252 - 1897836 | 21078.0 |
| hypothetical protein | SB49_RS08430 | Not Available | Negative | 1898060 - 1898608 | 20497.9 |
| response regulator | SB49_RS08435 | Not Available | Positive | 1898883 - 1899308 | 16250.3 |
| cpbp family intramembrane glutamic endopeptidase | SB49_RS08440 | Not Available | Positive | 1899581 - 1900288 | 26630.4 |
| duf4440 domain-containing protein | SB49_RS08445 | Not Available | Positive | 1900589 - 1901056 | 18038.7 |
| srpbcc domain-containing protein | SB49_RS08450 | Not Available | Positive | 1901173 - 1901622 | 17505.6 |
| ydei family protein | SB49_RS08455 | Not Available | Positive | 1901653 - 1902210 | 21698.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
