Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein thx | SB49_RS00795 | Not Available | Negative | 166208 - 166336 | 4914.19 |
| uracil-dna glycosylase family protein | SB49_RS00800 | Not Available | Positive | 166506 - 167189 | 26107.5 |
| hypothetical protein | SB49_RS15995 | Not Available | Negative | 167232 - 167396 | 6347.54 |
| fad-containing oxidoreductase | SB49_RS00805 | Not Available | Negative | 167484 - 168860 | 49660.1 |
| m20/m25/m40 family metallo-hydrolase | SB49_RS00810 | Not Available | Negative | 169133 - 170629 | 55714.6 |
| hypothetical protein | SB49_RS00815 | Not Available | Negative | 170729 - 170956 | 8494.08 |
| tryptophan synthase subunit alpha | SB49_RS00820 | Not Available | Negative | 170996 - 171757 | 27997.7 |
| tryptophan synthase subunit beta | SB49_RS00825 | Not Available | Negative | 171768 - 172952 | 43408.9 |
| phosphoribosylanthranilate isomerase | SB49_RS00830 | Not Available | Negative | 172965 - 173633 | 25491.8 |
| indole-3-glycerol phosphate synthase trpc | SB49_RS00835 | Not Available | Negative | 173689 - 174477 | 29077.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
