Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS08360 | Not Available | Positive | 1883780 - 1884601 | 29774.9 |
| 7-carboxy-7-deazaguanine synthase quee | SB49_RS08365 | Not Available | Negative | 1884711 - 1885343 | 23877.8 |
| duf4886 domain-containing protein | SB49_RS08370 | Not Available | Positive | 1885567 - 1886403 | 32006.3 |
| s41 family peptidase | SB49_RS08375 | Not Available | Positive | 1886607 - 1887836 | 46935.9 |
| hypothetical protein | SB49_RS08380 | Not Available | Positive | 1887931 - 1888311 | 14896.2 |
| tetratricopeptide repeat protein | SB49_RS08385 | Not Available | Positive | 1888295 - 1889074 | 30774.5 |
| mbl fold metallo-hydrolase | SB49_RS16195 | Not Available | Positive | 1889628 - 1889735 | 4378.24 |
| rep-associated tyrosine transposase | SB49_RS08395 | Not Available | Positive | 1889903 - 1890469 | 22434.8 |
| hypothetical protein | SB49_RS08400 | Not Available | Positive | 1890817 - 1891386 | 21524.2 |
| duf6920 family protein | SB49_RS08405 | Not Available | Positive | 1891594 - 1892730 | 43282.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
