Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | SB49_RS08260 | Not Available | Negative | 1864328 - 1865179 | 32279.0 |
| thioredoxin | SB49_RS08265 | Not Available | Positive | 1865342 - 1865644 | 11187.7 |
| universal stress protein | SB49_RS08270 | Not Available | Negative | 1865687 - 1866535 | 31776.5 |
| response regulator | SB49_RS08275 | Not Available | Negative | 1866645 - 1867697 | 39288.2 |
| pas domain-containing sensor histidine kinase | SB49_RS08280 | Not Available | Negative | 1867700 - 1868932 | 46704.3 |
| group iii truncated hemoglobin | SB49_RS08285 | Not Available | Negative | 1869018 - 1869407 | 15484.7 |
| exonuclease domain-containing protein | SB49_RS08290 | Not Available | Positive | 1869557 - 1870945 | 52369.0 |
| hypothetical protein | SB49_RS08295 | Not Available | Negative | 1871076 - 1871258 | 7043.06 |
| duf2892 domain-containing protein | SB49_RS08300 | Not Available | Negative | 1871597 - 1871815 | 7970.99 |
| rhodanese-like domain-containing protein | SB49_RS08305 | Not Available | Negative | 1872105 - 1873514 | 51510.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
