Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | SB49_RS08210 | Not Available | Negative | 1855720 - 1856481 | 27283.2 |
| duf2267 domain-containing protein | SB49_RS08215 | Not Available | Negative | 1856652 - 1857104 | 17200.6 |
| hypothetical protein | SB49_RS08220 | Not Available | Negative | 1857340 - 1858068 | 27919.6 |
| 2-hydroxyacid dehydrogenase | SB49_RS08225 | Not Available | Negative | 1858553 - 1859563 | 37482.5 |
| hypothetical protein | SB49_RS08230 | Not Available | Negative | 1859544 - 1860200 | 25352.6 |
| hypothetical protein | SB49_RS08235 | Not Available | Negative | 1860253 - 1860672 | 16298.6 |
| mbl fold metallo-hydrolase rna specificity domain-containing protein | SB49_RS08240 | Not Available | Negative | 1860747 - 1862117 | 51879.9 |
| atp cone domain-containing protein | SB49_RS08245 | Not Available | Negative | 1862127 - 1862954 | 31839.6 |
| mechanosensitive ion channel family protein | SB49_RS08250 | Not Available | Negative | 1862967 - 1863878 | 34868.7 |
| hypothetical protein | SB49_RS08255 | Not Available | Negative | 1863914 - 1864321 | 15238.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
