Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | SB49_RS08160 | Not Available | Negative | 1842860 - 1845361 | 95073.3 |
| cation-transporting p-type atpase | SB49_RS08165 | Not Available | Negative | 1845586 - 1848246 | 98568.7 |
| hsp20/alpha crystallin family protein | SB49_RS08170 | Not Available | Negative | 1848434 - 1848901 | 18031.2 |
| duf302 domain-containing protein | SB49_RS08175 | Not Available | Positive | 1849135 - 1849524 | 14389.6 |
| flavin reductase | SB49_RS08180 | Not Available | Positive | 1849624 - 1850235 | 22751.9 |
| m20 family metallopeptidase | SB49_RS08185 | Not Available | Positive | 1850232 - 1851392 | 42033.3 |
| hpf/raia family ribosome-associated protein | SB49_RS08190 | Not Available | Positive | 1851403 - 1852755 | 49589.5 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | SB49_RS08195 | Not Available | Positive | 1852759 - 1854480 | 63773.6 |
| fmn-binding protein | SB49_RS08200 | Not Available | Negative | 1854540 - 1855214 | 24852.0 |
| hypothetical protein | SB49_RS08205 | Not Available | Negative | 1855211 - 1855723 | 19912.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
