Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | SB49_RS08110 | Not Available | Positive | 1833559 - 1835271 | 65299.5 |
| response regulator transcription factor | SB49_RS08115 | Not Available | Positive | 1835486 - 1835869 | 14275.4 |
| bon domain-containing protein | SB49_RS08120 | Not Available | Positive | 1836180 - 1836875 | 25961.6 |
| exodeoxyribonuclease iii | SB49_RS08125 | Not Available | Positive | 1837021 - 1837785 | 29126.6 |
| hypothetical protein | SB49_RS08130 | Not Available | Negative | 1837809 - 1838213 | 15905.3 |
| hypothetical protein | SB49_RS08135 | Not Available | Negative | 1838235 - 1839008 | 30711.7 |
| erythromycin esterase family protein | SB49_RS08140 | Not Available | Positive | 1839258 - 1840568 | 50345.7 |
| hypothetical protein | SB49_RS08145 | Not Available | Negative | 1840576 - 1841076 | 18760.3 |
| ytxh domain-containing protein | SB49_RS08150 | Not Available | Positive | 1841267 - 1841611 | 12569.2 |
| response regulator | SB49_RS08155 | Not Available | Negative | 1841818 - 1842888 | 39911.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
