Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase family protein | SB49_RS07970 | Not Available | Negative | 1796945 - 1799743 | 107646.0 |
| giy-yig nuclease family protein | SB49_RS07975 | Not Available | Negative | 1799872 - 1800711 | 31833.1 |
| hypothetical protein | SB49_RS07980 | Not Available | Negative | 1801023 - 1802402 | 54259.3 |
| helix-turn-helix domain-containing protein | SB49_RS07985 | Not Available | Negative | 1802411 - 1802686 | 10553.8 |
| hypothetical protein | SB49_RS07990 | Not Available | Negative | 1802785 - 1803465 | 26948.4 |
| phage integrase sam-like domain-containing protein | SB49_RS07995 | Not Available | Negative | 1803452 - 1804711 | 48802.1 |
| ragb/susd family nutrient uptake outer membrane protein | SB49_RS16025 | Not Available | Negative | 1805107 - 1805274 | 6569.84 |
| had-ia family hydrolase | SB49_RS08000 | Not Available | Positive | 1805984 - 1808032 | 80268.5 |
| yqae/pmp3 family membrane protein | SB49_RS15875 | Not Available | Positive | 1808317 - 1808469 | 5436.13 |
| atp-binding protein | SB49_RS08005 | Not Available | Positive | 1809032 - 1810873 | 69802.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
