Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate--glucose phosphotransferase | SB49_RS07920 | Not Available | Positive | 1784299 - 1785036 | 26302.9 |
| translational gtpase typa | SB49_RS07925 | Not Available | Negative | 1785105 - 1786904 | 67331.4 |
| dinb family protein | SB49_RS07930 | Not Available | Negative | 1787137 - 1787625 | 18503.5 |
| 3-deoxy-8-phosphooctulonate synthase | SB49_RS07935 | Not Available | Positive | 1787805 - 1788626 | 30110.6 |
| nad(p)-dependent oxidoreductase | SB49_RS07940 | Not Available | Negative | 1788705 - 1789910 | 45311.2 |
| Tmrna,resume consensus sequence (at 90): tttaattggcgaaaataa | Not Available | Not Available | Positive | 1790178 - 1790574 | Not Available |
| hypothetical protein | SB49_RS07950 | Not Available | Negative | 1791141 - 1792181 | 40578.2 |
| restriction system-associated aaa family atpase | SB49_RS07955 | Not Available | Negative | 1792181 - 1793911 | 66850.9 |
| restriction endonuclease subunit s | SB49_RS07960 | Not Available | Negative | 1793908 - 1795290 | 52418.8 |
| type i restriction-modification system subunit m | SB49_RS07965 | Not Available | Negative | 1795287 - 1796945 | 62977.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
