Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | SB49_RS00745 | Not Available | Positive | 156729 - 157316 | 22291.2 |
| m14 family metallopeptidase | SB49_RS00750 | Not Available | Negative | 157320 - 159083 | 67781.2 |
| response regulator | SB49_RS00755 | Not Available | Negative | 159155 - 159559 | 15482.9 |
| pas domain-containing protein | SB49_RS00760 | Not Available | Negative | 159546 - 161396 | 70153.6 |
| pantetheine-phosphate adenylyltransferase | SB49_RS00765 | Not Available | Negative | 161677 - 162135 | 17291.0 |
| d-alanine--d-alanine ligase | SB49_RS00770 | Not Available | Negative | 162166 - 163146 | 36614.1 |
| pasta domain-containing protein | SB49_RS00775 | Not Available | Positive | 163290 - 163880 | 22281.1 |
| rlua family pseudouridine synthase | SB49_RS00780 | Not Available | Positive | 163884 - 164915 | 39210.8 |
| peroxide stress protein yaaa | SB49_RS00785 | Not Available | Positive | 165021 - 165782 | 29221.1 |
| hypothetical protein | SB49_RS00790 | Not Available | Positive | 165810 - 166205 | 14704.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
