Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS07865 | Not Available | Negative | 1771658 - 1771978 | 11661.8 |
| ompa family protein | SB49_RS07870 | Not Available | Negative | 1772196 - 1773287 | 41643.4 |
| nipsnap family protein | SB49_RS07875 | Not Available | Positive | 1773551 - 1774342 | 30720.9 |
| duf885 family protein | SB49_RS07880 | Not Available | Negative | 1774432 - 1776258 | 69847.4 |
| hypothetical protein | SB49_RS07890 | Not Available | Positive | 1776408 - 1777178 | 30139.8 |
| cold-shock protein | SB49_RS07895 | Not Available | Negative | 1777300 - 1777491 | 6957.2 |
| tonb-dependent receptor | SB49_RS07900 | Not Available | Negative | 1777662 - 1779416 | 65997.9 |
| tetratricopeptide repeat protein | SB49_RS07905 | Not Available | Negative | 1779442 - 1782465 | 114662.0 |
| cell division atp-binding protein ftse | SB49_RS07910 | Not Available | Positive | 1782704 - 1783387 | 25483.2 |
| nudix domain-containing protein | SB49_RS16265 | Not Available | Positive | 1783420 - 1784238 | 30867.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
