Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secdf | SB49_RS07815 | Not Available | Negative | 1756265 - 1759228 | 107468.0 |
| malate dehydrogenase | SB49_RS07820 | Not Available | Negative | 1759377 - 1760303 | 32317.3 |
| hypothetical protein | SB49_RS07825 | Not Available | Positive | 1760556 - 1760930 | 14203.9 |
| duf6588 family protein | SB49_RS07830 | Not Available | Negative | 1761337 - 1762353 | 36704.4 |
| dna topoisomerase (atp-hydrolyzing) subunit b | SB49_RS07835 | Not Available | Negative | 1762498 - 1764453 | 72778.5 |
| asparagine synthase b | SB49_RS07840 | Not Available | Negative | 1764767 - 1766437 | 63283.3 |
| duf2911 domain-containing protein | SB49_RS07845 | Not Available | Positive | 1766678 - 1767217 | 19373.1 |
| fusc family membrane protein | SB49_RS07850 | Not Available | Positive | 1767355 - 1769601 | 84516.5 |
| amidohydrolase | SB49_RS07855 | Not Available | Negative | 1769625 - 1771244 | 59157.5 |
| lpxtg cell wall anchor domain-containing protein | SB49_RS07860 | Not Available | Negative | 1771387 - 1771602 | 7787.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
