Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS16020 | Not Available | Positive | 1744391 - 1745725 | 48602.8 |
| ompp1/fadl family transporter | SB49_RS07770 | Not Available | Positive | 1745760 - 1747265 | 55347.8 |
| t9ss type b sorting domain-containing protein | SB49_RS07775 | Not Available | Negative | 1747318 - 1748715 | 50732.5 |
| t9ss type b sorting domain-containing protein | SB49_RS07780 | Not Available | Negative | 1748837 - 1750639 | 65922.6 |
| gtp cyclohydrolase i fole | SB49_RS07785 | Not Available | Positive | 1750775 - 1751455 | 25607.7 |
| cysteine--trna ligase | SB49_RS07790 | Not Available | Positive | 1751470 - 1752951 | 55956.8 |
| membrane protein insertion efficiency factor yidd | SB49_RS07795 | Not Available | Positive | 1753033 - 1753269 | 8698.82 |
| prolipoprotein diacylglyceryl transferase | SB49_RS07800 | Not Available | Positive | 1753359 - 1754324 | 37181.6 |
| duf192 domain-containing protein | SB49_RS07805 | Not Available | Positive | 1754341 - 1754835 | 18759.7 |
| atp-binding cassette domain-containing protein | SB49_RS07810 | Not Available | Positive | 1754969 - 1756237 | 48095.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
