Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease adaptor clps | SB49_RS07660 | Not Available | Negative | 1726932 - 1727207 | 10295.2 |
| m57 family metalloprotease | SB49_RS07665 | Not Available | Negative | 1727337 - 1728194 | 31365.5 |
| 50s ribosomal protein l11 methyltransferase | SB49_RS07670 | Not Available | Negative | 1728306 - 1729148 | 31776.5 |
| triose-phosphate isomerase | SB49_RS07675 | Not Available | Negative | 1729232 - 1729981 | 26938.4 |
| bt_3928 family protein | SB49_RS07680 | Not Available | Negative | 1730003 - 1731100 | 41230.6 |
| duf1599 domain-containing protein | SB49_RS07685 | Not Available | Negative | 1731121 - 1731666 | 20908.3 |
| dihydropteroate synthase | SB49_RS07690 | Not Available | Positive | 1731770 - 1732591 | 30455.3 |
| diadenylate cyclase | SB49_RS07695 | Not Available | Positive | 1732647 - 1733435 | 29582.8 |
| abc transporter atp-binding protein | SB49_RS07700 | Not Available | Negative | 1733437 - 1735203 | 66005.0 |
| trna pseudouridine(38-40) synthase trua | SB49_RS07705 | Not Available | Negative | 1735205 - 1735954 | 28425.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
