Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS07610 | Not Available | Negative | 1705412 - 1707256 | 68737.0 |
| hypothetical protein | SB49_RS07615 | Not Available | Negative | 1707347 - 1710805 | 131340.0 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | SB49_RS07620 | Not Available | Negative | 1710893 - 1712206 | 49463.3 |
| sugar porter family mfs transporter | SB49_RS07625 | Not Available | Negative | 1712215 - 1713753 | 56245.7 |
| glycoside hydrolase family 16 protein | SB49_RS07630 | Not Available | Negative | 1713887 - 1714996 | 40341.7 |
| hypothetical protein | SB49_RS07635 | Not Available | Negative | 1715078 - 1715962 | 31809.9 |
| hypothetical protein | SB49_RS07640 | Not Available | Negative | 1715984 - 1719253 | 115058.0 |
| ragb/susd family nutrient uptake outer membrane protein | SB49_RS07645 | Not Available | Negative | 1719274 - 1720746 | 54316.3 |
| tonb-dependent receptor | SB49_RS07650 | Not Available | Negative | 1720752 - 1723787 | 109396.0 |
| triple tyrosine motif-containing protein | SB49_RS07655 | Not Available | Negative | 1724028 - 1726841 | 108253.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
