Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium/sodium antiporter | SB49_RS07560 | Not Available | Negative | 1697197 - 1698135 | 33629.3 |
| blai/meci/copy family transcriptional regulator | SB49_RS07565 | Not Available | Positive | 1698298 - 1698657 | 14252.1 |
| m56 family metallopeptidase | SB49_RS07570 | Not Available | Positive | 1698659 - 1700542 | 72323.8 |
| hypothetical protein | SB49_RS07575 | Not Available | Positive | 1701065 - 1701217 | 5808.4 |
| laci family dna-binding transcriptional regulator | SB49_RS07580 | Not Available | Negative | 1701222 - 1702220 | 37283.2 |
| Trna-arg | Not Available | Not Available | Positive | 1702478 - 1702551 | Not Available |
| hypothetical protein | SB49_RS07590 | Not Available | Negative | 1702879 - 1703100 | 8039.54 |
| universal stress protein | SB49_RS07595 | Not Available | Negative | 1703328 - 1704167 | 31586.6 |
| yeee/yede family protein | SB49_RS07600 | Not Available | Positive | 1704345 - 1704902 | 20018.8 |
| duf6691 family protein | SB49_RS07605 | Not Available | Positive | 1704905 - 1705318 | 15147.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
