Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS07460 | Not Available | Positive | 1677251 - 1677463 | 7977.76 |
| orotidine-5'-phosphate decarboxylase | SB49_RS07465 | Not Available | Negative | 1677476 - 1678294 | 30362.6 |
| peptide chain release factor 1 | SB49_RS07470 | Not Available | Negative | 1678350 - 1679426 | 40670.0 |
| duf3570 domain-containing protein | SB49_RS07475 | Not Available | Negative | 1679580 - 1680860 | 47963.8 |
| duf4266 domain-containing protein | SB49_RS07480 | Not Available | Negative | 1680868 - 1681077 | 7662.36 |
| fad:protein fmn transferase | SB49_RS07485 | Not Available | Negative | 1681117 - 1682112 | 36454.1 |
| thioredoxin family protein | SB49_RS07490 | Not Available | Negative | 1682109 - 1682543 | 16676.3 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | SB49_RS07495 | Not Available | Negative | 1682571 - 1683008 | 15478.4 |
| air synthase related protein | SB49_RS07500 | Not Available | Negative | 1683060 - 1684238 | 43200.4 |
| carboxypeptidase regulatory-like domain-containing protein | SB49_RS07505 | Not Available | Negative | 1684346 - 1685857 | 54811.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
