Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dj-1/pfpi family protein | SB49_RS07410 | Not Available | Positive | 1662865 - 1663605 | 27635.4 |
| hypothetical protein | SB49_RS07415 | Not Available | Negative | 1663592 - 1665004 | 54450.7 |
| lrp/asnc family transcriptional regulator | SB49_RS07420 | Not Available | Negative | 1665135 - 1665590 | 17226.1 |
| hypothetical protein | SB49_RS07425 | Not Available | Positive | 1665711 - 1666148 | 16852.6 |
| methylmalonyl-coa mutase family protein | SB49_RS07430 | Not Available | Negative | 1666212 - 1669646 | 128073.0 |
| formyltetrahydrofolate deformylase | SB49_RS07435 | Not Available | Positive | 1669790 - 1670641 | 32361.2 |
| duf4197 domain-containing protein | SB49_RS07440 | Not Available | Positive | 1670727 - 1671431 | 26084.4 |
| tonb-dependent receptor | SB49_RS07445 | Not Available | Positive | 1671776 - 1674811 | 109973.0 |
| ragb/susd family nutrient uptake outer membrane protein | SB49_RS07450 | Not Available | Positive | 1674824 - 1676179 | 49793.1 |
| alpha/beta fold hydrolase | SB49_RS07455 | Not Available | Negative | 1676262 - 1677041 | 30159.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
