Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | SB49_RS00695 | Not Available | Positive | 148803 - 150071 | 48938.1 |
| acyl-coa-binding protein | SB49_RS00700 | Not Available | Negative | 150076 - 150342 | 9961.04 |
| phosphatidylserine decarboxylase family protein | SB49_RS00705 | Not Available | Negative | 150332 - 151000 | 25309.2 |
| phosphatidate cytidylyltransferase | SB49_RS00710 | Not Available | Negative | 150990 - 151793 | 30173.9 |
| lud domain-containing protein | SB49_RS00715 | Not Available | Negative | 151797 - 152408 | 23130.7 |
| atp-dependent zinc metalloprotease ftsh | SB49_RS00720 | Not Available | Negative | 152480 - 154462 | 73549.1 |
| ribosome silencing factor | SB49_RS00725 | Not Available | Negative | 154472 - 154849 | 14209.7 |
| biotin--[acetyl-coa-carboxylase] ligase | SB49_RS00730 | Not Available | Positive | 154943 - 155683 | 27668.9 |
| hypothetical protein | SB49_RS00735 | Not Available | Negative | 155680 - 156072 | 14734.1 |
| orotate phosphoribosyltransferase | SB49_RS00740 | Not Available | Negative | 156080 - 156721 | 23662.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
