Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m14 family metallopeptidase | SB49_RS07255 | Not Available | Positive | 1635208 - 1637727 | 95284.5 |
| pp_01434 | SB49_RS07260 | Not Available | Negative | 1637794 - 1638132 | Not Available |
| hypothetical protein | SB49_RS07265 | Not Available | Negative | 1638129 - 1638434 | 11317.2 |
| thioredoxin family protein | SB49_RS07270 | Not Available | Positive | 1638607 - 1639164 | 20711.9 |
| yfit family bacillithiol transferase | SB49_RS07275 | Not Available | Negative | 1639192 - 1639740 | 21266.5 |
| peroxiredoxin | SB49_RS07280 | Not Available | Positive | 1639894 - 1640532 | 23574.0 |
| pp_01439 | SB49_RS07285 | Not Available | Positive | 1640811 - 1641773 | Not Available |
| vf530 family dna-binding protein | SB49_RS07290 | Not Available | Positive | 1641796 - 1642047 | 9848.83 |
| cold-shock protein | SB49_RS07295 | Not Available | Positive | 1642233 - 1642424 | 7055.35 |
| peptidylprolyl isomerase | SB49_RS07300 | Not Available | Negative | 1643095 - 1644027 | 33351.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
