Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone-dependent dihydroorotate dehydrogenase | SB49_RS07205 | Not Available | Negative | 1624367 - 1625407 | 38575.2 |
| hypothetical protein | SB49_RS07210 | Not Available | Negative | 1625494 - 1625895 | 15236.6 |
| tonb-dependent receptor domain-containing protein | SB49_RS07215 | Not Available | Negative | 1626061 - 1628919 | 102691.0 |
| peptidase t | SB49_RS07220 | Not Available | Positive | 1629068 - 1630297 | 45693.6 |
| ydei family protein | SB49_RS07225 | Not Available | Positive | 1630299 - 1630892 | 23049.9 |
| preprotein translocase subunit yajc | SB49_RS07230 | Not Available | Negative | 1630952 - 1631245 | 11320.2 |
| duf1573 domain-containing protein | SB49_RS07235 | Not Available | Negative | 1631254 - 1631733 | 16775.1 |
| transcription antitermination factor nusb | SB49_RS07240 | Not Available | Negative | 1631786 - 1632733 | 36671.5 |
| abc transporter atp-binding protein | SB49_RS07245 | Not Available | Positive | 1632913 - 1634670 | 65901.4 |
| pur family dna/rna-binding protein | SB49_RS07250 | Not Available | Positive | 1634749 - 1635120 | 14795.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
