Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf255 domain-containing protein | SB49_RS07155 | Not Available | Positive | 1613371 - 1613871 | 19154.0 |
| imp dehydrogenase | SB49_RS07160 | Not Available | Negative | 1613944 - 1615416 | 52571.7 |
| heme-binding domain-containing protein | SB49_RS07165 | Not Available | Negative | 1615468 - 1615935 | 18126.4 |
| tonb-dependent receptor domain-containing protein | SB49_RS07170 | Not Available | Negative | 1615946 - 1618417 | 92665.4 |
| httm domain-containing protein | SB49_RS07175 | Not Available | Negative | 1618398 - 1619765 | 53679.2 |
| imelysin family protein | SB49_RS07180 | Not Available | Negative | 1619769 - 1620893 | 41660.8 |
| duf4856 domain-containing protein | SB49_RS07185 | Not Available | Negative | 1621000 - 1622220 | 44393.6 |
| hydroxymethylglutaryl-coa lyase | SB49_RS07190 | Not Available | Negative | 1622340 - 1623206 | 31877.0 |
| lyse family translocator | SB49_RS07195 | Not Available | Negative | 1623239 - 1623865 | 23035.0 |
| dabb family protein | SB49_RS07200 | Not Available | Positive | 1624009 - 1624356 | 13247.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
