Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | SB49_RS07105 | Not Available | Positive | 1603248 - 1604081 | 31942.9 |
| excinuclease abc subunit uvrb | SB49_RS07110 | Not Available | Positive | 1604225 - 1606213 | 76112.8 |
| m20/m25/m40 family metallo-hydrolase | SB49_RS07115 | Not Available | Positive | 1606224 - 1607762 | 57188.8 |
| hsp20/alpha crystallin family protein | SB49_RS07120 | Not Available | Negative | 1607826 - 1608251 | 16340.2 |
| hypothetical protein | SB49_RS07125 | Not Available | Negative | 1608379 - 1608780 | 15138.5 |
| duf1456 family protein | SB49_RS07130 | Not Available | Positive | 1608927 - 1609301 | 14400.7 |
| hypothetical protein | SB49_RS07135 | Not Available | Negative | 1609333 - 1609683 | 13073.0 |
| adp-forming succinate--coa ligase subunit beta | SB49_RS07140 | Not Available | Negative | 1609957 - 1611150 | 43043.8 |
| lon peptidase substrate-binding domain-containing protein | SB49_RS07145 | Not Available | Negative | 1611232 - 1611870 | 24851.3 |
| diaminopimelate decarboxylase | SB49_RS07150 | Not Available | Positive | 1612035 - 1613276 | 46218.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
