Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase | SB49_RS07005 | Not Available | Positive | 1582633 - 1583463 | 30470.5 |
| alpha/beta hydrolase | SB49_RS07010 | Not Available | Positive | 1583508 - 1584380 | 31941.3 |
| gdsl-type esterase/lipase family protein | SB49_RS07015 | Not Available | Positive | 1584517 - 1585161 | 24840.9 |
| family 20 glycosylhydrolase | SB49_RS07020 | Not Available | Positive | 1585194 - 1586813 | 61242.1 |
| amidohydrolase family protein | SB49_RS07025 | Not Available | Negative | 1586883 - 1590296 | 126939.0 |
| duf5606 domain-containing protein | SB49_RS07030 | Not Available | Negative | 1590414 - 1590839 | 16223.3 |
| peptide deformylase | SB49_RS07035 | Not Available | Negative | 1590899 - 1591489 | 22564.1 |
| duf1919 domain-containing protein | SB49_RS07040 | Not Available | Negative | 1591496 - 1592179 | 27501.0 |
| holliday junction resolvase ruvx | SB49_RS07045 | Not Available | Negative | 1592179 - 1592595 | 15617.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | SB49_RS07050 | Not Available | Positive | 1592698 - 1593513 | 29528.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
