Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl co-a mutase-associated gtpase meab | SB49_RS06950 | Not Available | Positive | 1570970 - 1572016 | 38447.9 |
| glycosyltransferase family 2 protein | SB49_RS06955 | Not Available | Positive | 1572052 - 1573008 | 36297.1 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | SB49_RS06960 | Not Available | Positive | 1572992 - 1573864 | 32867.6 |
| glycosyltransferase family 39 protein | SB49_RS06965 | Not Available | Negative | 1573861 - 1575519 | 63857.4 |
| phosphatase pap2 family protein | SB49_RS06970 | Not Available | Negative | 1575509 - 1576081 | 21840.2 |
| hypothetical protein | SB49_RS06975 | Not Available | Negative | 1576087 - 1576314 | 8957.21 |
| mate family efflux transporter | SB49_RS06980 | Not Available | Negative | 1576332 - 1577717 | 50884.2 |
| cation-translocating p-type atpase | SB49_RS06985 | Not Available | Positive | 1577937 - 1580432 | 91921.9 |
| nucleoside triphosphate pyrophosphohydrolase | SB49_RS06990 | Not Available | Negative | 1580508 - 1581281 | 29691.2 |
| sdr family oxidoreductase | SB49_RS07000 | Not Available | Negative | 1581798 - 1582442 | 23371.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
