Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SB49_RS06900 | Not Available | Negative | 1562295 - 1562543 | 8991.87 |
| hypothetical protein | SB49_RS06905 | Not Available | Negative | 1563020 - 1563268 | 8991.87 |
| hypothetical protein | SB49_RS06910 | Not Available | Negative | 1563745 - 1563993 | 9217.01 |
| peptidoglycan dd-metalloendopeptidase family protein | SB49_RS06915 | Not Available | Negative | 1564174 - 1564860 | 25309.0 |
| m28 family peptidase | SB49_RS06920 | Not Available | Negative | 1564886 - 1566982 | 77417.9 |
| peptide-methionine (s)-s-oxide reductase msra | SB49_RS06925 | Not Available | Positive | 1567186 - 1567851 | 25300.0 |
| cbm9 family sugar-binding protein | SB49_RS06930 | Not Available | Positive | 1567897 - 1568628 | 27730.1 |
| aldose epimerase family protein | SB49_RS06935 | Not Available | Positive | 1568808 - 1569713 | 33762.0 |
| organic hydroperoxide resistance protein | SB49_RS06940 | Not Available | Negative | 1569768 - 1570193 | 15420.9 |
| duf2911 domain-containing protein | SB49_RS06945 | Not Available | Positive | 1570407 - 1570967 | 21080.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
