Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2752 domain-containing protein | SB49_RS06805 | Not Available | Positive | 1540177 - 1540479 | 11319.6 |
| ccc motif membrane protein | SB49_RS06810 | Not Available | Positive | 1540496 - 1540828 | 12414.9 |
| ccc motif membrane protein | SB49_RS06815 | Not Available | Positive | 1540839 - 1541150 | 10978.7 |
| dna helicase recq | SB49_RS06820 | Not Available | Negative | 1541220 - 1543421 | 82184.8 |
| sis domain-containing protein | SB49_RS06825 | Not Available | Positive | 1543634 - 1544599 | 34416.9 |
| twin-arginine translocase subunit tatc | SB49_RS06830 | Not Available | Positive | 1544599 - 1545435 | 31425.1 |
| carboxymuconolactone decarboxylase family protein | SB49_RS06835 | Not Available | Positive | 1545419 - 1545769 | 12971.6 |
| lps export abc transporter atp-binding protein | SB49_RS06840 | Not Available | Positive | 1545833 - 1546573 | 27632.0 |
| phosphatidylcholine/phosphatidylserine synthase | SB49_RS06845 | Not Available | Negative | 1546632 - 1547387 | 27854.7 |
| duf4105 domain-containing protein | SB49_RS06850 | Not Available | Positive | 1547578 - 1548759 | 46395.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
