Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | SB49_RS06705 | Not Available | Positive | 1519561 - 1520739 | 43335.2 |
| tetratricopeptide repeat protein | SB49_RS06710 | Not Available | Positive | 1520839 - 1522236 | 54319.1 |
| duf368 domain-containing protein | SB49_RS06715 | Not Available | Positive | 1522268 - 1523191 | 33641.0 |
| duf368 domain-containing protein | SB49_RS06720 | Not Available | Positive | 1523199 - 1524218 | 38166.4 |
| shikimate dehydrogenase | SB49_RS06725 | Not Available | Positive | 1524190 - 1524945 | 28215.4 |
| duf349 domain-containing protein | SB49_RS06730 | Not Available | Positive | 1525154 - 1527364 | 86684.3 |
| dead/deah box helicase | SB49_RS06735 | Not Available | Negative | 1527419 - 1528684 | 46196.0 |
| nyn domain-containing protein | SB49_RS06740 | Not Available | Negative | 1528830 - 1529558 | 27508.0 |
| nuclear transport factor 2 family protein | SB49_RS06745 | Not Available | Positive | 1529692 - 1530156 | 17956.6 |
| ribonuclease y | SB49_RS06750 | Not Available | Negative | 1530224 - 1531792 | 57937.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
