Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3810 domain-containing protein | SB49_RS06655 | Not Available | Positive | 1504895 - 1505962 | 40987.3 |
| amidohydrolase family protein | SB49_RS06660 | Not Available | Positive | 1506045 - 1508996 | 108430.0 |
| amidohydrolase family protein | SB49_RS06665 | Not Available | Positive | 1509025 - 1510317 | 46917.2 |
| duf6503 family protein | SB49_RS06670 | Not Available | Negative | 1510394 - 1511209 | 31269.0 |
| rna methyltransferase | SB49_RS06675 | Not Available | Positive | 1511286 - 1512098 | 29568.7 |
| m48 family metallopeptidase | SB49_RS06680 | Not Available | Positive | 1512136 - 1513368 | 46776.2 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | SB49_RS06685 | Not Available | Positive | 1513413 - 1515617 | 83712.0 |
| fur family transcriptional regulator | SB49_RS06690 | Not Available | Positive | 1515659 - 1516114 | 18103.4 |
| adenylosuccinate synthase | SB49_RS06695 | Not Available | Positive | 1516129 - 1517400 | 46870.4 |
| mbl fold metallo-hydrolase | SB49_RS06700 | Not Available | Positive | 1517556 - 1519097 | 58765.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
