Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication/repair protein recf | SB49_RS06605 | Not Available | Positive | 1496517 - 1497596 | 41251.4 |
| hypothetical protein | SB49_RS06610 | Not Available | Positive | 1497598 - 1498017 | 16069.8 |
| duf721 domain-containing protein | SB49_RS06615 | Not Available | Positive | 1498017 - 1498313 | 11112.5 |
| nucleoside-diphosphate kinase | SB49_RS06620 | Not Available | Negative | 1498367 - 1498786 | 15195.0 |
| alkaline phosphatase d family protein | SB49_RS06625 | Not Available | Negative | 1498838 - 1499866 | 38795.9 |
| bifunctional oligoribonuclease/pap phosphatase nrna | SB49_RS06630 | Not Available | Positive | 1499947 - 1500963 | 37870.8 |
| gliding motility-associated peptidyl-prolyl isomerase gldi | SB49_RS06635 | Not Available | Positive | 1500960 - 1501514 | 21154.2 |
| peptidylprolyl isomerase | SB49_RS06640 | Not Available | Positive | 1501529 - 1502650 | 40601.5 |
| cbs domain-containing protein | SB49_RS06645 | Not Available | Negative | 1502749 - 1503210 | 17337.1 |
| aminoacyl-histidine dipeptidase | SB49_RS06650 | Not Available | Negative | 1503302 - 1504768 | 53462.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
