Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Sediminicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Sediminicola |
| Species | Sediminicola sp. YIK13 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1084088 bp
Thymine Count
1079039 bp
Guanine Count
705413 bp
Cytosine Count
701267 bp
Genome Length
3569807 bp
Protein-coding Genes
3114 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | SB49_RS06555 | Not Available | Positive | 1487520 - 1489211 | 64357.3 |
| wbqc family protein | SB49_RS06560 | Not Available | Positive | 1489233 - 1489865 | 24964.6 |
| duf6122 family protein | SB49_RS06565 | Not Available | Positive | 1489858 - 1490166 | 11746.9 |
| endonuclease/exonuclease/phosphatase family protein | SB49_RS06570 | Not Available | Negative | 1490167 - 1490964 | 30678.5 |
| rhomboid family intramembrane serine protease | SB49_RS06575 | Not Available | Negative | 1491201 - 1492070 | 32482.1 |
| rhomboid family intramembrane serine protease | SB49_RS06580 | Not Available | Negative | 1492073 - 1492816 | 28003.2 |
| dna mismatch repair endonuclease mutl | SB49_RS06585 | Not Available | Negative | 1492817 - 1494664 | 68434.7 |
| hypothetical protein | SB49_RS06590 | Not Available | Negative | 1494664 - 1494957 | 11938.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | SB49_RS06595 | Not Available | Negative | 1495142 - 1495624 | 17043.3 |
| tetratricopeptide repeat protein | SB49_RS06600 | Not Available | Negative | 1495628 - 1496392 | 28236.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
